HC22: Antimicrobial therapy
Discovery of antibiotics
The first antibiotic was saharsan, to cure Syphilis. This was a very toxic drug. Alexander Fleming discovered penicillin. He came back from a holiday and saw that on the dirty plates he left behind there were certain parts that weren't covered by bacteria. Here, a certain fungus was growing → penicillin. Penicillin was making a molecule which was able to kill bacteria. It took about 10 years until penicillin was used on an industrial level. After the 1980's, there was no new discovery of antibiotics.
Interactions
Antimicrobial therapy should be active against the microorganisms. There are several interactions necessary:
- Antimicrobial therapy «host
- Host «microorganism
- Microorganism «antimicrobial therapy
Antibiotics need to shift this balance in favor of the host. Two terms are very important to describe their effect:
- Pharmacodynamics describe this effect the drug has on the microorganism
- Pharmacokinetics describe the effect the host has on the drug
Pharmacodynamics
Classes of antibiotics
The correct antibiotic depends on the bacterium. Bacteria can be divided in groups:
- Gram positive versus gram negatives
- Aerobe versus anaerobe
Based on this, correct antibiotics can be prescribed:
- Penicillin
- Gram positive
- Aerobe and anaerobe
- Meropenem → broad spectrum
- Gram positive and gram negative
- Aerobe and anaerobe
- Cefuroxim
- Gram positive and gram negative
- Aerobe
- Metronidazol
- Gram positive and gram negative
- Anaerobe
- Ciprofloxacin
- Gram positive and gram negative
- Aerobe and anaerobe
Mechanism of action:
Different classes of antibiotics influence different parts of the bacteria:
- Antibiotics active on the cell wall: inhibit the crosslinking of peptidoglycans → inhibit the integrity of the cell wall → bacteria can't divide
- Penicillin
- Cephalosporine
- Carbapenem
- Glycopeptides
- Vancomycin
- Antibiotics active on the cell membrane
- Colistin
- Daptomycin
- Antibiotics active on ribosomes: inhibit protein synthesis
- Aminoglycosides
- Tetracycline
- Macrolides
- Clindamycin
- Antibiotics that effect DNA synthesis
- Quinolones/ciprofloxacin
- Effect DNA gyrase, an enzyme that is important for reading DNA
- Sulfonamides
- Blocks folic acid synthesis, an essential building block for bacteria
- Quinolones/ciprofloxacin
- Antibiotics active in the cytoplasm
- Metronidazole/imidazole
Beta-lactams:
There are several beta-lactam antibiotics:
- Penicillin derivatives
- Penicillin G
- Flucloxacillin
- Amoxicillin
- Amoxicillin + clavulanic acid
- Cephalosporins
- Cephuroxim
- Many others
Gram-negative bacteria have a different cell wall than gram-positive bacteria → have a much thinner peptidoglycan layer which cannot contain the colored fluid. Beta-lactams affect the synthesis of peptidoglycans of both gram-positive and gram-negative bacteria → the antibiotics mainly form a problem for bacteria when they are dividing.
The molecular mechanism is as follows:
- Peptidoglycan chains need to be crosslinked
- Penicillin is blocking transpeptidase
- The peptidoglycan chains cannot be crosslinked any longer
Low dosages of penicillin won't affect the bacteria. At a certain dose, there suddenly will be an effect. However, if the dose is increased again, the effect won't become any bigger. This can be shown in a concentration versus effect curve. This curve is different for every class of antibiotics.
Glycopeptides:
Glycopeptides have a different approach than beta lactams. Although they also inhibit the cell wall, they bind to aa-terminus of the peptide blocking the transpeptidase. The pharmacodynamic curve of glycopeptides is almost the same as that of penicillin.
Inhibitors of protein synthesis:
Protein synthesis inhibition occurs on different parts of the ribosome. Aminoglycosides, tetracycline, macrolides and clindamycin all bind to a different part of the ribosome. Their effect is mainly the same.
Inhibitors of DNA synthesis:
Quinolones inhibit the reading of the DNA. Sulfonamides inhibit folic acid synthesis → no precursors can enter.
Choice of antimicrobial agent:
Drugs are either bacteriostatic or bactericidal:
- Bacteriostatic drugs
- Able to inhibit growth
- Usually not sufficient to kill the bacteria
- Antibiotics:
- Macrolides
- Tetracyclines
- Bactericidal drugs
- Used in case of:
- Infection of the blood stream
- Sepsis
- Endocarditis
- Sites are outside the reach of the immune system
- CNS
- Lack of immune cells
- Granulocytopenia
- Infection of the blood stream
- Usually kill the bacteria
- Antibiotics:
- Betalactam
- Aminoglycoside
- Chinolone
- Used in case of:
If bacteriostatic drugs are subscribed and then taken away, the bacteria will be able to grow again. This can also happen if bactericidal drugs are given in their MIC (minimal inhibitory concentration) dosage → bacteria will stop dividing temporarily. However, if the antibiotics are washed away in 24 hours, the bacteria will start growing again. These effects can be prevented if the antibiotics are given in a higher dosage. The amount of the dose determines whether the drug is bactericidal or bacteriostatic:
- If the concentration in which the bacteria are killed no matter what is 4 or less times as big as the MIC, the antibiotics are bactericidal
- If the concentration in which the bacteria are killed no matter what is higher, the antibiotics are bacteriostatic
Effect:
Antibiotics cannot be effective in case of:
- No growth
- In case of inhibitors of cell wall synthesis
- Low pH or low pO2
- A certain pH is required for the antibiotic to unfold or be activated
- Abscesses, tissue necrosis
- The antibiotic cannot reach the tissue
- Molecules in abscesses can bind to antibiotics
- Foreign bodies
- Catheters, prosthesis
- Cannot be reached by the immune system itself, but can by bacteria
Case:
A 19-year-old female student enters the ER with:
- Fever, deep shock, diarrhea
- Generalized redness, conjunctivitis
- Menstrual period
She is admitted to the ICU immediately. The diagnosis is toxic shock syndrome, also known as tampon disease. This is caused by staphylococcus aureus.
The shock is caused by massive amounts of toxins which are diffusing into the body, produced by the staphylococcus aureus growing inside the tampon. In 10% of cases, these toxins can act as superantigens. These antigens release a cytotoxic storm from the antigen presenting cells.
Because young women are often well informed, the prevalence of this disease is decreasing. Several forms of treatment are possible:
- Removal of the tampon
- The main treatment
- IV immunoglobulins
- To remove the toxin
- Antibiotic blocking of exotoxin production
- Block the protein synthesis
- Clindamycin or gentamycin
The population or the aureus is very dense → cell division isn't very important. They mostly are in stationary growth phase. This is why, if exotoxins have a major role in the pathogenesis, it's important to block the protein synthesis → protein synthesis blocking antibiotics need to be prescribed.
The difference between staphylococcal and streptococcal shock syndrome is very important → streptococcal shock syndrome is an invasive infection and has a worse prognosis.
Pharmacokinetics
ADME-phases:
For an antibiotic to reach the site, it has to undergo 4 phases:
- Absorption
- Forms a problem when the gut is diseased
- Distribution
- The drug goes to the site of infection
- Metabolism
- For example the first pass effect in the liver
- Excretion
- Antibiotics can be excreted in active of inactive form
Drug concentration:
Pharmacists always report the total concentration of the drug. However, this isn't the same as the free concentration:
- The total concentration also includes the antibiotics that have bound to proteins
- The free concentration is the effective concentration → the unbound serum concentration
- It is the amount that will go to the site of infection
Privileged sites:
There are several privileged target sites which are hard for antibiotics to reach, for example tight junctions to the cerebral fluid. This doesn't form a problem in case of meningitis → the inflammatory response will reduce the diffusion barrier, making it possible for antibiotics to pass.
There also are pumps which can remove the antibiotics from the fluid or can get a higher dose of antibiotics in the brain in case of brain abscesses. Abscesses also need to be treated by removing the excessive fluid.
High concentrations:
If the antibiotic concentration if much higher than the MIC, it won't have an increased effect in comparison to a dosage that is only a little higher. In fact, it may cause side effects. Effects of a too high dosage of penicillin are:
- Gastro-intestinal side effects
- Thrombocytopenia
- Decreased kidney function
Dosage:
The initial dosage is completely dependent on the volume of distribution, the maintenance dosage is dependent on the clearance.
Pharmacokinetics versus pharmacodynamics
Pharmacokinetics are the concentration versus time, pharmacodynamics are the effect versus the concentration. Combined, this results in the effect versus the time curve. This curve is different for every antibiotic, even when the concentration-time curves are similar.
Antibiotics can be divided into groups based on when they have their optimal effect:
- Time/MIC
- Cmax/MIC
- AUC/MIC
Time/MIC:
There are antibiotics whose effect can be measured by their time above MIC → whenever they are above MIC, they are inhibiting/killing the bacteria:
- Beta lactam
- Macrolides
- Clindamycine
- Vancomycine
If the time above MIC is increased, the treatment will improve.
Cmax/MIC:
There also are antibiotics whose effect depends on the Cmax above MIC:
- Aminoglycosides
These antibiotics are dosed once a day, in very high peaks.
AUC/MIC:
Some antibiotics are in between. Their success is best correlated with the AUC above MIC:
- Doxycycline
- Fluoroquinolones
Resistance
Bacteria will try everything to counteract antibiotic mechanisms. They can do multiple things to induce resistance:
- Exclusion barrier
- Altered target
- Enzymatic inactivation
Evolution:
Resistance comes from millions of years of evolution of bacteria creating a resistance against plants, fungi and other microorganisms. Due to selection pression, the strongest, most resistant bacteria survive.
Examples:
2 examples of what bacteria can do to make themselves resistant are:
- ESBL: bacteria can make ESBL to become resistant against antibiotics
- About 5% of the population carries bacteria which produce ESBL
- NDM-1: an enzyme that makes bacteria resistant to a broad range of beta lactam antibiotics
Staphylococcus aureus:
Staphylococcus aureus is carried by 30% of humans in the nose. This colonized bacteria usually is an MSSA staphyloccocus aureus, which is sensitive to antibiotics like flucoxacillin and cefuroxim. There also are MRSA staphyloccocus aureus (methicillin resistant S. aureus), which are hospital acquired.
Join with a free account for more service, or become a member for full access to exclusives and extra support of WorldSupporter >>
Mechanisms of Disease 1 2020/2021 UL
- Mechanisms of Disease 1 HC1: Introduction to G2MD1
- Mechanisms of Disease 1 HC2: Introduction to the immune system
- Mechanisms of Disease 1 HC3: Innate and adaptive immune responses & key cytokines
- Mechanisms of Disease 1 HC4: Pathology of normal immune response
- Mechanisms of Disease 1 HC5: B- and T-cell generation and diversity
- Mechanisms of Disease 1 HC6: Mechanisms of adaptive immunity
- Mechanisms of Disease 1 HC7: Effector mechanisms of antibodies
- Mechanisms of Disease 1 HC8: B-cell development and antibodies
- Mechanisms of Disease 1 HC9: Tissue injury and repair
- Mechanisms of Disease 1 HC10: Repair mechanism
- Mechanisms of Disease 1 HC11: Pathology of inflammatory reactions
- Mechanisms of Disease 1 HC12: Introduction to infectious diseases
- Mechanisms of Disease 1 HC13: Bacteria
- Mechanisms of Disease 1 HC14: Viruses
- Mechanisms of Disease 1 HC15: Fungi and parasites
- Mechanisms of Disease 1 HC16: Invaders
- Mechanisms of Disease 1 HC17: Host versus invader
- Mechanisms of Disease 1 HC18: Immune deficiencies and infection risk
- Mechanisms of Disease 1 HC19: Pathology of infectious diseases
- Mechanisms of Disease 1 HC20: Diagnostics of infectious diseases
- Mechanisms of Disease 1 HC21: Essential microorganisms
- Mechanisms of Disease 1 HC extra: Mycobacterial infections (tuberculosis)
- Mechanisms of Disease 1 HC22: Antimicrobial therapy
- Mechanisms of Disease 1 HC23: Principles of antibiotic pharmacotherapy
- Mechanisms of Disease 1 HC24: Introduction MOOC
- Mechanisms of Disease 1 HC25: Epidemiology
- Mechanisms of Disease 1 HC26: Prevention and control
- Mechanisms of Disease 1 HC extra: COVID-19
- Mechanisms of Disease 1 HC27: Mechanisms of hypersensitivity reactions
- Mechanisms of disease 1 HC28: Pathology of allergy
- Mechanisms of Disease 1 HC29: Asthma
- Mechanisms of Disease 1 HC30: Pathology of autoimmunity
- Mechanisms of Disease 1 HC31: HLA and autoimmunity
- Mechanisms of Disease 1 HC32: Vasculitis
- Mechanisms of Disease 1 HC33: Systemic Lupus Erythematosus
- Mechanisms of Disease 1 HC35: Infections and autoimmunity
- Mechanisms of Disease 1 HC36: Immune cells in rheumatoid arthritis
- Mechanisms of Disease 1 HC37+38: Pharmacology: immunosuppression
- Mechanisms of Disease 1 HC39: Pathology of transplantation
Contributions: posts
Spotlight: topics
Mechanisms of Disease 1 2020/2021 UL
Deze bundel bevat aantekeningen van alle hoorcolleges van het blok Mechanisms of Disease 1 van de studie Geneeskunde aan de Universiteit Leiden, collegejaar 2020/2021.
This bundle contains notes of all lectures from the module Mechanisms of Disease 1, Medicine, Leiden
...- Lees verder over Mechanisms of Disease 1 2020/2021 UL
- 1711 keer gelezen
Online access to all summaries, study notes en practice exams
- Check out: Register with JoHo WorldSupporter: starting page (EN)
- Check out: Aanmelden bij JoHo WorldSupporter - startpagina (NL)
How and why use WorldSupporter.org for your summaries and study assistance?
- For free use of many of the summaries and study aids provided or collected by your fellow students.
- For free use of many of the lecture and study group notes, exam questions and practice questions.
- For use of all exclusive summaries and study assistance for those who are member with JoHo WorldSupporter with online access
- For compiling your own materials and contributions with relevant study help
- For sharing and finding relevant and interesting summaries, documents, notes, blogs, tips, videos, discussions, activities, recipes, side jobs and more.
Using and finding summaries, notes and practice exams on JoHo WorldSupporter
There are several ways to navigate the large amount of summaries, study notes en practice exams on JoHo WorldSupporter.
- Use the summaries home pages for your study or field of study
- Use the check and search pages for summaries and study aids by field of study, subject or faculty
- Use and follow your (study) organization
- by using your own student organization as a starting point, and continuing to follow it, easily discover which study materials are relevant to you
- this option is only available through partner organizations
- Check or follow authors or other WorldSupporters
- Use the menu above each page to go to the main theme pages for summaries
- Theme pages can be found for international studies as well as Dutch studies
Do you want to share your summaries with JoHo WorldSupporter and its visitors?
- Check out: Why and how to add a WorldSupporter contributions
- JoHo members: JoHo WorldSupporter members can share content directly and have access to all content: Join JoHo and become a JoHo member
- Non-members: When you are not a member you do not have full access, but if you want to share your own content with others you can fill out the contact form
Quicklinks to fields of study for summaries and study assistance
Main summaries home pages:
- Business organization and economics - Communication and marketing -International relations and international organizations - IT, logistics and technology - Law and administration - Leisure, sports and tourism - Medicine and healthcare - Pedagogy and educational science - Psychology and behavioral sciences - Society, culture and arts - Statistics and research
- Summaries: the best textbooks summarized per field of study
- Summaries: the best scientific articles summarized per field of study
- Summaries: the best definitions, descriptions and lists of terms per field of study
- Exams: home page for exams, exam tips and study tips
Main study fields:
Business organization and economics, Communication & Marketing, Education & Pedagogic Sciences, International Relations and Politics, IT and Technology, Law & Administration, Medicine & Health Care, Nature & Environmental Sciences, Psychology and behavioral sciences, Science and academic Research, Society & Culture, Tourisme & Sports
Main study fields NL:
- Studies: Bedrijfskunde en economie, communicatie en marketing, geneeskunde en gezondheidszorg, internationale studies en betrekkingen, IT, Logistiek en technologie, maatschappij, cultuur en sociale studies, pedagogiek en onderwijskunde, rechten en bestuurskunde, statistiek, onderzoeksmethoden en SPSS
- Studie instellingen: Maatschappij: ISW in Utrecht - Pedagogiek: Groningen, Leiden , Utrecht - Psychologie: Amsterdam, Leiden, Nijmegen, Twente, Utrecht - Recht: Arresten en jurisprudentie, Groningen, Leiden
JoHo can really use your help! Check out the various student jobs here that match your studies, improve your competencies, strengthen your CV and contribute to a more tolerant world
1463 |
Add new contribution